Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCACAGCCGCCCGGACTCTGGTATCAGAACCGGCTGCAGA
((((((((((((((((..(((&))).)))))))).....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030760
GeneSymbolS1PR5
Binding site1219,1261
Score0.846
Seed1
Au0.353
Energy-24.3
Binding len42
Me-3.938
Phylopstem0.14847048108108113
Phylopflank0.8080042875
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure