Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCAAGAAGCAGTTGTT
..((((((((..((((..(((&)))..))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030763
GeneSymbolHMGN5
Binding site495,516
Score1.0
Seed1
Au0.603
Energy-18.6
Binding len21
Me-11.129
Phylopstem1.9133068749999997
Phylopflank1.5661086375000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure