Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAAGTGCCCAAGCAGTTGCT
..(((((((((((((((....&))))...)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030763
GeneSymbolHMGN5
Binding site470,492
Score0.846
Seed1
Au0.588
Energy-17.6
Binding len22
Me-4.957
Phylopstem1.1308556666666665
Phylopflank1.7324546537499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure