Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCCACCTGCCGCTGTG
..(((((.(((((.(((((((&)))))))..))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030767
GeneSymbolAKNA
Binding site4208,4230
Score0.846
Seed0
Au0.412
Energy-20.6
Binding len22
Me-8.127
Phylopstem0.6081824628571428
Phylopflank1.4591235085
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure