Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACCTCAGCCCAACCAGCTGCC
..(((((((.(((((..((((&.)))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030767
GeneSymbolAKNA
Binding site4247,4272
Score0.923
Seed1
Au0.324
Energy-20.6
Binding len22
Me-6.433
Phylopstem0.06806074857142858
Phylopflank0.42113995849999986
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure