Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCGCCGCCGCTGCCGCTGAGCTGCAGC
(((((((((((((.((..(((&.)))...)).)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030771
GeneSymbolCCDC34
Binding site170,201
Score0.846
Seed1
Au0.309
Energy-24.8
Binding len26
Me-4.794
Phylopstem0.7043541999999998
Phylopflank0.39104806249999985
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure