Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGGAGAGAATCAGCGTGTAC
.((((((((((((((((((((&))))))))))))........)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030773
GeneSymbolTUBB1
Binding site214,244
Score1.0
Seed1
Au0.456
Energy-23.4
Binding len30
Me-3.793
Phylopstem3.8455006896551724
Phylopflank3.4306644275
Longest consecutive pairings12
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure