Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGT
((((((((((((((((((((((&)))))))))...................))))............)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330442
GeneSymbolMTA3
Binding site3935,3990
Score1.0
Seed1
Au0.485
Energy-23.4
Binding len55
Me-3.938
Phylopstem-0.06436353888888889
Phylopflank-0.015050397499999996
Longest consecutive pairings9
Position of longest consecutive pairings46
Pairings in 3prime end8
Position3UTR
2D Structure