Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTTATTTCCTCAGCTGTAC
.((((((((.((..(((((((&)))..))))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030774
GeneSymbolOR51E2
Binding site2462,2485
Score0.923
Seed1
Au0.603
Energy-19.2
Binding len23
Me-7.182
Phylopstem-0.2446693625
Phylopflank0.7990749675
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure