Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCC
..(((((((((..((..((((&.))))..))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030785
GeneSymbolRSPH6A
Binding site1408,1457
Score0.846
Seed1
Au0.324
Energy-23.2
Binding len23
Me-9.826
Phylopstem1.6745684222222224
Phylopflank2.5185939025
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure