Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCGGCAACAAC
(((..(((((((((((.....&)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030786
GeneSymbolSYNC
Binding site1009,1026
Score0.923
Seed0
Au0.426
Energy-19.5
Binding len17
Me-11.089
Phylopstem0.2680438
Phylopflank1.0225359425
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure