Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGCTCCGTACGCTGCGC
.(((((((((((.((((.(((&))).))))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030789
GeneSymbolHM13
Binding site260,283
Score0.923
Seed1
Au0.338
Energy-22.8
Binding len23
Me-5.082
Phylopstem5.607679166666668
Phylopflank4.20398417875
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure