Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACTGTAGATGCAAA
(((((.(((((((((((....&))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030790
GeneSymbolITFG1
Binding site1430,1448
Score0.923
Seed0
Au0.588
Energy-21.6
Binding len18
Me-5.839
Phylopstem4.425865454545455
Phylopflank5.382100049999999
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure