Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCACAGCTGTACCCTGTGAT
((((((.(((((((((.((((&))))...)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030794
GeneSymbolTDRD3
Binding site2329,2354
Score0.846
Seed0
Au0.574
Energy-18.5
Binding len25
Me-5.481
Phylopstem0.3362302666666667
Phylopflank2.932587654999999
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure