Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGACCTGCAGGCTTACAAAGGCGCAGG
((((((((((((((((((((.&)))))))).)).)))).)).........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030797
GeneSymbolCYRIA
Binding site364,397
Score0.923
Seed1
Au0.471
Energy-20.0
Binding len33
Me-3.938
Phylopstem0.24052741875000005
Phylopflank0.367887285
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure