Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCACACCGCAAGCTCGCT
..(((((((((((((..((((&))))..)).)))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030798
GeneSymbolRCC1L
Binding site1968,1991
Score0.846
Seed1
Au0.309
Energy-21.2
Binding len23
Me-5.19
Phylopstem0.7375714250000001
Phylopflank2.9250332425000005
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure