Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTAGCGCCTGTGCTTTCTCTCAGGCTCCGTGTGCCAGGG
.((((((((((...((.((...&.))..))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030801
GeneSymbolMAGED4B
Binding site700,740
Score0.846
Seed1
Au0.324
Energy-20.3
Binding len21
Me-9.286
Phylopstem1.6132479999999998
Phylopflank1.7176274575
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure