Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGCTCAGGGCCACGATCCCCTTCCAGCTGCAGC
(((((((((((((((((....&))))))))).....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030802
GeneSymbolFAM117A
Binding site165,204
Score0.846
Seed1
Au0.25
Energy-23.6
Binding len39
Me-3.938
Phylopstem3.606494289473683
Phylopflank2.4210612999999994
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end4
PositionCDS
2D Structure