Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGACCGGCTGCAGA
(((((((..(((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030803
GeneSymbolATG16L1
Binding site222,240
Score0.846
Seed1
Au0.368
Energy-19.7
Binding len18
Me-8.276
Phylopstem3.6045585714285715
Phylopflank3.259288596250001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure