Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCTTGTGTCCAGGTA
((((((.((((((.(.(((...&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030806
GeneSymbolC1orf21
Binding site1083,1100
Score0.923
Seed0
Au0.632
Energy-16.8
Binding len17
Me-6.571
Phylopstem2.6063441666666667
Phylopflank3.0455537049999997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure