Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CGCTTGAATATTATTTTTGATTTGACCACCAAGATGTAATGATGA
((((((((((((((((.....&.))))))).))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_030806
GeneSymbolC1orf21
Binding site10118,10163
Score0.846
Seed1
Au0.706
Energy-17.0
Binding len19
Me-3.938
Phylopstem0.9571535176470588
Phylopflank0.9558280199999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure