Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGGCATCCTATTAAATGCCACGCCAGCAGTCCGGGTCTG
(((((((((.((((((((...&)))))))).....................)))....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_030806
GeneSymbolC1orf21
Binding site2206,2249
Score1.0
Seed1
Au0.456
Energy-24.5
Binding len43
Me-5.18
Phylopstem0.258156
Phylopflank0.36649491874999984
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end5
Position3UTR
2D Structure