Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGTGGCTGTT
..((((((((((((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030806
GeneSymbolC1orf21
Binding site2593,2608
Score0.923
Seed1
Au0.559
Energy-21.7
Binding len15
Me-4.957
Phylopstem2.246974142857143
Phylopflank1.3972821325
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure