Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCCAGCGGCTGCAGC
(((((((((((((.((.....&)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030810
GeneSymbolTXNDC5
Binding site283,301
Score0.846
Seed1
Au0.397
Energy-22.2
Binding len18
Me-4.794
Phylopstem0.0854651714285714
Phylopflank-0.2358055
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure