Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGGCCAAGGCGAGCCTGACCATCCCGCTGGTGCC
..(((.(.(((((((((((((&))))))))).....................)))).).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030818
GeneSymbolYJU2B
Binding site876,917
Score0.846
Seed0
Au0.324
Energy-20.6
Binding len41
Me-9.172
Phylopstem2.2371675882352937
Phylopflank3.3005582212499998
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure