Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGACCGCAGCA
.....((((((((((......&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030818
GeneSymbolYJU2B
Binding site722,733
Score0.846
Seed0
Au0.338
Energy-19.6
Binding len11
Me-13.899
Phylopstem2.6705911
Phylopflank3.9691499337500007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure