Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&TGGGTGCCAAAGGA
........((((((((((.((&)).)))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_030820
GeneSymbolCOL21A1
Binding site1835,1849
Score0.846
Seed0
Au0.515
Energy-15.7
Binding len14
Me-19.424
Phylopstem3.026809
Phylopflank2.527454343875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure