Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTGAGCAGCTGTG
..((((((((....(((((((&)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030907
GeneSymbolCPLANE2
Binding site1138,1157
Score0.846
Seed1
Au0.353
Energy-24.6
Binding len19
Me-13.275
Phylopstem-0.546227
Phylopflank0.8944904449999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure