Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTACTCAGCCACAGCTGCGGA
(((((((((.(((((..((((&)))).....))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030913
GeneSymbolSEMA6C
Binding site856,881
Score1.0
Seed1
Au0.456
Energy-26.6
Binding len25
Me-5.413
Phylopstem0.19363793333333335
Phylopflank0.596837884175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure