Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGCAGCCCCCTGAGCTGCAGG
((((((((..((((((.((((&)))))))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030914
GeneSymbolURM1
Binding site2175,2199
Score0.872
Seed1
Au0.353
Energy-21.1
Binding len24
Me-6.236
Phylopstem-0.093848275
Phylopflank-0.16136830375
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure