Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTCTGCCCAGCTGCAGT
(((((((((.(((.(...(((&)))...).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030915
GeneSymbolLBH
Binding site1546,1567
Score0.846
Seed1
Au0.382
Energy-22.0
Binding len21
Me-6.27
Phylopstem-0.42086288888888895
Phylopflank-0.3807240114999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure