Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCCCGCCGGCAGCTTCCAGGCGCGGCTGCGGC
(((((((((((.(((.(((.(&.).))).))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030916
GeneSymbolNECTIN4
Binding site652,689
Score0.846
Seed1
Au0.25
Energy-25.2
Binding len23
Me-7.517
Phylopstem-0.6534585090909091
Phylopflank-0.596630325
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure