Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTAGACCCTTTGAGACTTAAGAGCTGCAT
.(((((((..(((((((((((&)))))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030918
GeneSymbolSNX27
Binding site4268,4306
Score1.0
Seed1
Au0.485
Energy-20.9
Binding len38
Me-6.092
Phylopstem0.20469536545454545
Phylopflank0.044054583250000015
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure