Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGC
(((((((((.((((((.....&.))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030918
GeneSymbolSNX27
Binding site5633,5674
Score1.0
Seed1
Au0.441
Energy-20.4
Binding len18
Me-5.18
Phylopstem-0.0040182888888888975
Phylopflank0.06041645374999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure