Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCTGCCGCCGCCGCGGCCCGCAGCTGCC
..((((((((((((((..(((&.)))...)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030929
GeneSymbolKAZALD1
Binding site175,208
Score0.923
Seed1
Au0.279
Energy-27.5
Binding len23
Me-4.957
Phylopstem0.3308009866666667
Phylopflank0.6470901837499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure