Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACCAGCTGAACTCTACAGGCATCCCCCAGCTGCGAT
(((((((((((((((..((((&))))...))))))..................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030929
GeneSymbolKAZALD1
Binding site993,1034
Score0.923
Seed1
Au0.426
Energy-22.0
Binding len41
Me-4.171
Phylopstem1.4381316666666668
Phylopflank1.8503103268875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure