Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAATATTACAAGGAACTAGCAGCCAGAATTGTTGTAGCTGCAGT
((((((((((((((((..(((&.))).)))))).........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030934
GeneSymbolTRMT1L
Binding site1510,1557
Score0.846
Seed1
Au0.5
Energy-21.9
Binding len31
Me-3.938
Phylopstem0.398297304
Phylopflank0.14906694999999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure