Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCGCCGCGGTCGCT
..((.((((((((.(((((((&))))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030935
GeneSymbolTSC22D4
Binding site938,958
Score0.846
Seed0
Au0.368
Energy-25.9
Binding len20
Me-9.933
Phylopstem-1.332
Phylopflank0.7961164624999999
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure