Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCCGCAAATTCTAAATCTTAAAACAACTCTGCAAA
((((((.((((((((...(((&)))))))))))......................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030945
GeneSymbolC1QTNF3
Binding site2559,2599
Score1.0
Seed0
Au0.574
Energy-17.9
Binding len40
Me-5.714
Phylopstem0.8719270625000002
Phylopflank0.459279705
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure