Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCATTTTAGGGGGCCGCAGCAGGCAGA
((((.(((((((((.(.....&.).)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030946
GeneSymbolOR14J1
Binding site3154,3185
Score0.962
Seed0
Au0.441
Energy-22.2
Binding len19
Me-8.792
Phylopstem0.05039400000000001
Phylopflank-0.09848578250000001
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end2
Position3UTR
2D Structure