Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATACAGCCCAGCGTGCC
..(((((((.(((((((..((&)).))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030953
GeneSymbolTIGD6
Binding site3106,3125
Score0.846
Seed1
Au0.485
Energy-19.4
Binding len19
Me-6.2
Phylopstem1.2680646285714288
Phylopflank0.5721437924999999
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure