Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACTCACTTCAGCTGG
...((((((.(((.(((((((&)))))))..))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030954
GeneSymbolRNF170
Binding site2242,2262
Score0.923
Seed0
Au0.544
Energy-18.9
Binding len20
Me-8.614
Phylopstem0.7025149571428572
Phylopflank0.40706756875
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure