Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGCGGACCCCTGCCCCCTGTGGCACGCGGCTGCGGA
(((((((((((((((..(((.&.))).)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030958
GeneSymbolSLCO5A1
Binding site380,420
Score0.923
Seed1
Au0.294
Energy-24.4
Binding len22
Me-4.171
Phylopstem1.7691869000000002
Phylopflank0.47238757000000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure