Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCAGGTGTGTATTCTGTTGGCAGCTGCGGCCTGGCT
..((.(((((((((((.....&.)))))))))))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030959
GeneSymbolOR12D3
Binding site407,447
Score0.821
Seed0
Au0.456
Energy-20.3
Binding len18
Me-9.076
Phylopstem-0.35116355272727273
Phylopflank-0.38601414475000007
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure