Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGCAGCTGCGGGCACCCAAGACACTGCCCTGCCTGCAT
.(((((((((((((((.((((&))))...)))))))))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030961
GeneSymbolTRIM56
Binding site325,369
Score0.846
Seed1
Au0.368
Energy-22.0
Binding len44
Me-3.793
Phylopstem0.53449095
Phylopflank0.6713728050000001
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure