Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACATGTAGCTAGGA
.((((((.(((.((((((((((&))))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030965
GeneSymbolST6GALNAC5
Binding site3471,3491
Score0.891
Seed1
Au0.721
Energy-22.6
Binding len20
Me-9.454
Phylopstem0.72235498
Phylopflank0.2530396575
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure