Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTCCAGTTGCT
..(((((((.((((((.((((&)))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030966
GeneSymbolKRTAP1-3
Binding site215,234
Score0.846
Seed1
Au0.412
Energy-22.8
Binding len19
Me-6.2
Phylopstem0.45875857142857146
Phylopflank-0.011730037499999957
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure