Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCCCCCTTGGTCGGCAGATTTGTGCCCTTTGCAGCAGTGGCAGCTGCC
..((((((((.(((((((((.&.)))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030971
GeneSymbolSFXN3
Binding site981,1034
Score0.846
Seed1
Au0.426
Energy-24.8
Binding len23
Me-7.782
Phylopstem1.807619088888889
Phylopflank4.634986277499998
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure