Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCATCTCCAGCTGCTGTCGCCCCAGCTGCTGTGTGTCCAGGTG
((((((((((((..((((....&.)))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_030976
GeneSymbolKRTAP4-6
Binding site380,428
Score0.865
Seed1
Au0.353
Energy-21.1
Binding len19
Me-6.084
Phylopstem-0.2579080846153846
Phylopflank-0.37569963000000006
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure