Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGCGGCGGCGGCTGCGC
.(((((((((.(((((...((&))..))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030978
GeneSymbolARPC5L
Binding site1098,1118
Score0.846
Seed1
Au0.176
Energy-23.6
Binding len20
Me-6.618
Phylopstem1.0811491222222223
Phylopflank0.5799609812500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure